PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_39635_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family ERF
Protein Properties Length: 94aa    MW: 10413.4 Da    PI: 10.801
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_39635_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.81.5e-095692132
                                  AP2  1 sgykGVrwdkkrgrWvAeIrdpse....ng..krkrfs 32
                                         + y+GVr++  +g+WvAeIr+p +     g  k +r +
  cra_locus_39635_iso_1_len_279_ver_3 56 CVYRGVRQRT-WGKWVAEIREPASnladAGlgKAARLW 92
                                         68*****999.**********64424422253336666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-45675IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-65786IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.6E-115793IPR001471AP2/ERF domain
PROSITE profilePS5103213.1825794IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
XRRNPEFVVE TLLKWKNLNS SNDDDGEGVS KMRKISAKGS KKGCMRGKGG PENSGCVYRG  60
VRQRTWGKWV AEIREPASNL ADAGLGKAAR LWLX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803153.14e-28PREDICTED: uncharacterized protein LOC104248568
RefseqXP_016462903.14e-28PREDICTED: uncharacterized protein LOC107785980
SwissprotO809175e-25DRE2E_ARATH; Dehydration-responsive element-binding protein 2E
TrEMBLW5A5K71e-27W5A5K7_WHEAT; Uncharacterized protein
STRINGBRADI2G29960.12e-26(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA79651530